Basic Information
Locus ID:
BH02.2493
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
ATPase family associated with various cellular activities (AAA)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH02 | 32061306 | 32065730 | + | BH02.2493 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 78,316.28 Da | 38.12 | 83.71 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 436 | 569 | 4.50649E-22 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 438 | 568 | 3.8E-39 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 397 | 609 | 1.19E-53 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 570 | 676 | 3.8E-87 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 397 | 684 | 3.8E-87 | IPR027417 |
| SMART | SM00382 | AAA_5 | 434 | 571 | 6.1E-19 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 541 | 560 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 604 | 685 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 604 | 677 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28000.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 1.81E-200 |
| RefSeq | XP_025814082.1 | peroxisomal biogenesis factor 6-like [Panicum hallii] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 9.29E-60 | |
| TrEMBL | A0A2S3HTS8 | AAA domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_5G238600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology