halophFGD

Basic Information

Locus ID: BH02.2484

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: NB-ARC domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
BH02	31929849	31936515	+	BH02.2484

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.06	154,899.44 Da	40.30	81.74	-0.29

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd14798	RX-CC_like	47	136	4.78412E-9	IPR038005
Pfam	PF00931	NB-ARC domain	184	426	2.5E-36	IPR002182
Pfam	PF18052	Rx N-terminal domain	12	97	1.9E-10	IPR041118
SUPERFAMILY	SSF52058	L domain-like	502	877	2.04E-18	-
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	181	438	1.29E-47	IPR027417
Gene3D	G3DSA:1.10.10.10	-	424	514	1.2E-11	IPR036388
Gene3D	G3DSA:3.40.50.300	-	171	326	1.4E-25	IPR027417
Gene3D	G3DSA:1.20.5.4130	-	11	132	1.1E-15	-
Gene3D	G3DSA:1.10.8.430	-	336	423	5.5E-10	IPR042197
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	523	883	1.5E-19	IPR032675
PRINTS	PR00364	Disease resistance protein signature	371	385	2.8E-12	-
PRINTS	PR00364	Disease resistance protein signature	202	217	2.8E-12	-
PRINTS	PR00364	Disease resistance protein signature	769	785	2.8E-12	-
PRINTS	PR00364	Disease resistance protein signature	274	288	2.8E-12	-

Gene Ontology

Molecular Function:

GO:0043531 (ADP binding)

KEGG Pathway

KO Term:

K20623 (typhasterol/6-deoxotyphasterol 2alpha-hydroxylase)

Pathway:

ko00905 (Brassinosteroid biosynthesis) map00905 (Brassinosteroid biosynthesis) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)

Reaction:

R07470 (Typhasterol + NADPH + H+ + Oxygen <=> Castasterone + NADP+ + H2O) R07474 (6-Deoxotyphasterol + NADPH + H+ + Oxygen <=> 6-Deoxocastasterone + NADP+ + H2O)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT3G46730.1	NB-ARC domain-containing disease resistance protein.	6.3E-50
RefSeq	XP_034593055.1	disease resistance protein RGA5-like isoform X1 [Setaria viridis]	0
Swiss-Prot	F7J0N2	Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=1 SV=1	3.89E-186
TrEMBL	A0A4U6UKW1	NB-ARC domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_5G238300v2 PE=3 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	1	BH02.2484
Poaceae	Hordeum vulgare	8	HORVU.MOREX.r3.5HG0534540.1, HORVU.MOREX.r3.6HG0550480.1 ... HORVU.MOREX.r3.7HG0634660.1, HORVU.MOREX.r3.7HG0634910.1, HORVU.MOREX.r3.7HG0635010.1, HORVU.MOREX.r3.7HG0635020.1.CDS1, HORVU.MOREX.r3.7HG0636970.1.CDS1, HORVU.MOREX.r3.7HG0636980.1
Poaceae	Lolium multiflorum	4	gene-QYE76_006977, gene-QYE76_048723, gene-QYE76_048728 ... gene-QYE76_048738
Poaceae	Oryza sativa	1	LOC_Os10g22484.1
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0205164, Pt_Chr0205206
Poaceae	Thinopyrum elongatum	3	Tel2E01G1030200, Tel7E01G023300, Tel7E01G062300
Poaceae	Triticum dicoccoides	10	gene_TRIDC4AG067680, gene_TRIDC4AG068620 ... gene_TRIDC4AG068990, gene_TRIDC4AG071520, gene_TRIDC4AG071870, gene_TRIDC5BG051980, gene_TRIDC6AG009220, gene_TRIDC7AG002040, gene_TRIDC7AG002050, gene_TRIDC7AG002910
Poaceae	Triticum aestivum	22	TraesCS1D02G381400.1, TraesCS2D02G511600.2 ... TraesCS3D02G491500.2, TraesCS4A02G457900.1, TraesCS4A02G458300.1, TraesCS4A02G464900.1, TraesCS4A02G467000.1, TraesCS4A02G491300.1, TraesCS5D02G032189.1.cds1, TraesCS6B02G099900.3, TraesCS7A02G005100.1, TraesCS7A02G007200.1, TraesCS7A02G007600.1, TraesCS7A02G021800.1, TraesCS7A02G022800.1, TraesCS7A02G031300.1, TraesCS7A02G032200.1, TraesCS7B02G405700.1, TraesCS7D02G020700.1, TraesCS7D02G022400.1, TraesCS7D02G027700.2, TraesCSU02G133200.1