Basic Information
Locus ID:
BH02.2349
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH02 | 30503967 | 30505930 | - | BH02.2349 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.51 | 63,071.89 Da | 43.82 | 103.11 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 279 | 469 | 3.9E-32 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 258 | 540 | 5.72E-61 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 346 | 556 | 4.0E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 240 | 345 | 6.9E-20 | - |
| SMART | SM00220 | serkin_6 | 275 | 539 | 4.9E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 275 | 556 | 28.753515 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 384 | 396 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 281 | 303 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20050.1 | Protein kinase superfamily protein. | 7.1E-71 |
| RefSeq | XP_025815421.1 | probable receptor-like protein kinase At5g20050 [Panicum hallii] | 1.9E-187 |
| Q94C25 | Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana OX=3702 GN=At5g20050 PE=2 SV=1 | 6.88E-70 | |
| TrEMBL | A0A3L6R2V9 | Protein kinase domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM08G18220 PE=3 SV=1 | 1.19E-188 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||