Basic Information
Locus ID:
BH02.2238
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH02 | 29201172 | 29205529 | + | BH02.2238 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.32 | 148,255.70 Da | 48.55 | 75.71 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 725 | 973 | 4.0554E-131 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1118 | 1382 | 3.0E-124 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 756 | 892 | 1.0E-23 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 753 | 891 | 1.79E-19 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 727 | 976 | 1.0E-58 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 635 | 1387 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 753 | 982 | 30.981348 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 105 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 537 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 553 | 598 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 560 | 578 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 242 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 579 | 598 | - | - |
| Coils | Coil | Coil | 1076 | 1096 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_004969392.1 | translocase of chloroplast 159, chloroplastic isoform X1 [Setaria italica] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | A0A368R8R2 | AIG1-type G domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_5G255600v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology