Basic Information
Locus ID:
BH02.2172
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH02 | 28393450 | 28397511 | - | BH02.2172 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.05 | 70,103.32 Da | 39.16 | 100.20 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 143 | 203 | 1.8E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 68 | 3.8E-4 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 438 | 680 | 3.6E-28 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 62 | 235 | 2.67E-40 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 440 | 680 | 8.7E-41 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 179 | 242 | 2.7E-16 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 432 | 484 | 1.0E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 485 | 683 | 3.9E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 178 | 3.6E-38 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 396 | 683 | 22.294277 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 364 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 364 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 4.14E-92 |
| RefSeq | XP_025814548.1 | LRR receptor-like serine/threonine-protein kinase FEI 2 [Panicum hallii] | 1.19E-228 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 1.45E-31 | |
| TrEMBL | A0A2T8ILD2 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_5G270300 PE=4 SV=1 | 2.7E-227 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology