Basic Information
Locus ID:
BH02.1980
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH02 | 25543284 | 25547565 | + | BH02.1980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 64,504.87 Da | 44.48 | 72.71 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 453 | 566 | 2.1E-10 | IPR001525 |
| SUPERFAMILY | SSF46934 | UBA-like | 115 | 159 | 9.01E-6 | IPR009060 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 258 | 449 | 4.57E-25 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 452 | 567 | 3.03E-18 | IPR029063 |
| Gene3D | G3DSA:1.10.8.10 | - | 130 | 167 | 5.7E-6 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 422 | 574 | 2.0E-26 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 19 | 73 | 3.3E-5 | - |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 26 | 71 | 9.125106 | IPR015940 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 249 | 575 | 131.86969 | IPR030380 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 452 | 575 | 20.17683 | IPR001525 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 128 | 172 | 8.546775 | IPR015940 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 202 | 223 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 1.85E-174 |
| RefSeq | XP_039813639.1 | DNA (cytosine-5)-methyltransferase DRM2-like [Panicum virgatum] | 0 |
| Q10SU5 | DNA (cytosine-5)-methyltransferase DRM2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRM2 PE=1 SV=1 | 4.4E-253 | |
| TrEMBL | A0A8T0RRY3 | SAM-dependent MTase DRM-type domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_5NG286162 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology