HalophFGD

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Basic Information
Locus ID: BH02.1865
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
BH02 21721154 21721970 - BH02.1865
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.09 23,609.67 Da 44.25 80.00 -0.53
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
ProSiteProfiles PS51318 Twin arginine translocation (Tat) signal profile. 1 47 7.679487 IPR006311
MobiDBLite mobidb-lite consensus disorder prediction 44 59 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 20 - -
MobiDBLite mobidb-lite consensus disorder prediction 37 61 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 21 - -
Coils Coil Coil 107 127 - -
Coils Coil Coil 68 88 - -
Best hit
Source Best Hit ID Description E-value
TrEMBL A2YWW5 Nucleotide exchange factor GrpE OS=Oryza sativa subsp. indica OX=39946 GN=OsI_29827 PE=4 SV=1 1.33E-113
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 45 AH01.1738, AH01.1924, AH02.1406, AH02.1839, AH04.1107 ...
AH04.2291, AH05.1513, AH05.207, AH05.2637, AH06.104, AH08.1514, BH01.746, BH02.1865, BH04.1204, BH04.727, BH04.944, BH05.2107, BH05.3460, BH07.224, BH09.342, BH09.988, CH01.2970, CH01.4685, CH02.1861, CH03.2041, CH03.3265, CH04.2574, CH04.496, CH05.2592, CH05.3232, CH06.1542, CH06.747, CH07.2475, CH07.3213, CH07.921, CH08.1220, CH08.1238, CH08.1267, CH08.1830, CH08.2703, CH08.422, CH09.1881, CH09.996, Contig2112.1, Contig2139.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.