Basic Information
Locus ID:
BH02.1642
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
NAD dependent epimerase/dehydratase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH02 | 16738185 | 16739246 | - | BH02.1642 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 37,570.61 Da | 48.45 | 60.14 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 21 | 197 | 6.6E-70 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 122 | 195 | 3.6E-32 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 13 | 121 | 1.6E-36 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 245 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 342 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 7.1E-100 |
| RefSeq | XP_004968700.1 | ubiquitin fusion degradation protein 1 homolog [Setaria italica] | 4.0E-128 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 5.66E-60 | |
| TrEMBL | A0A1E5VMH9 | Ubiquitin fusion degradation protein 1-like protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0012705 PE=3 SV=1 | 1.47E-142 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology