halophFGD

Basic Information

Locus ID: BH02.1064

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
BH02	10176741	10178183	+	BH02.1064

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.45	53,719.94 Da	57.39	74.58	-0.37

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF81383	F-box domain	68	118	1.54E-5	IPR036047
MobiDBLite	mobidb-lite	consensus disorder prediction	42	79	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_002442530.1	uncharacterized protein LOC8084401 [Sorghum bicolor]	5.11E-95
TrEMBL	A0A368QNT2	F-box domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_3G394200v2 PE=4 SV=1	2.26E-110

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	7	AH05.4050, AH05.4051, BH02.1064, BH05.4152, CH05.4370 ... CH05.4371, CH05.4378
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_5AG0397900, gene-QOZ80_5AG0397910 ... gene-QOZ80_5BG0446460, gene-QOZ80_5BG0446470
Poaceae	Sporobolus alterniflorus	6	Chr04G015920, Chr04G018650, Chr04G019030, Chr06G016670 ... Chr06G016680, Chr06G019430