Basic Information
Locus ID:
BH02.100
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Holliday junction DNA helicase ruvB N-terminus
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH02 | 1082429 | 1088368 | + | BH02.100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.22 | 93,697.79 Da | 48.89 | 91.35 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 571 | 704 | 4.38213E-23 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 573 | 703 | 1.5E-38 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 727 | 769 | 5.6E-12 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 533 | 785 | 5.11E-61 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 532 | 704 | 2.6E-97 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 705 | 787 | 2.6E-97 | - |
| SMART | SM00382 | AAA_5 | 569 | 706 | 4.2E-21 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 676 | 695 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 520 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 186 | 235 | - | - |
| Coils | Coil | Coil | 43 | 63 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_039810125.1 | spastin-like isoform X2 [Panicum virgatum] | 0 |
| Q9P7J5 | Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC24B10.10c PE=3 SV=1 | 3.67E-67 | |
| TrEMBL | A0A2T7DT73 | AAA domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_5G534700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology