Basic Information
Locus ID:
BH01.959
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 8304844 | 8308647 | + | BH01.959 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 102,596.14 Da | 39.64 | 84.86 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 617 | 889 | 1.536E-95 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 614 | 842 | 1.9E-48 | IPR001245 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 410 | 449 | 8.8E-7 | IPR025875 |
| SUPERFAMILY | SSF52058 | L domain-like | 78 | 450 | 2.04E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 588 | 898 | 1.56E-79 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 340 | 4.1E-71 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 689 | 907 | 6.7E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 345 | 471 | 1.1E-29 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 573 | 688 | 2.5E-37 | - |
| SMART | SM00220 | serkin_6 | 611 | 897 | 3.8E-45 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 611 | 892 | 41.078365 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 736 | 748 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 617 | 639 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 473 | 499 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 945 | 966 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 499 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 2.56E-306 |
| RefSeq | XP_004981977.1 | receptor protein kinase TMK1 [Setaria italica] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 2.46E-305 | |
| TrEMBL | A0A835FBU3 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_014543 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology