Basic Information
Locus ID:
BH01.789
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
IAA16
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 6792106 | 6794047 | + | BH01.789 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.35 | 25,014.26 Da | 43.54 | 65.41 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 25 | 224 | 1.2E-77 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 116 | 214 | 9.51E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 118 | 227 | 1.6E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 123 | 215 | 25.510302 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 99 | 123 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 1.09E-73 |
| RefSeq | XP_039828626.1 | auxin-responsive protein IAA13-like [Panicum virgatum] | 9.62E-153 |
| A2XLV9 | Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica OX=39946 GN=IAA13 PE=2 SV=1 | 9.17E-110 | |
| TrEMBL | A0A3L6TJJ8 | Auxin-responsive protein OS=Panicum miliaceum OX=4540 GN=C2845_PM01G28560 PE=3 SV=1 | 2.18E-151 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology