Basic Information
Locus ID:
BH01.581
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 5181932 | 5199357 | - | BH01.581 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.96 | 266,143.94 Da | 49.52 | 75.15 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09272 | RNase_HI_RT_Ty1 | 2202 | 2343 | 5.35018E-66 | - |
| CDD | cd01370 | KISc_KIP3_like | 14 | 349 | 2.93963E-162 | - |
| Pfam | PF00225 | Kinesin motor domain | 20 | 349 | 5.4E-107 | IPR001752 |
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1866 | 2110 | 7.5E-75 | IPR013103 |
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 1110 | 1231 | 1.8E-14 | - |
| Pfam | PF00098 | Zinc knuckle | 1289 | 1305 | 3.7E-4 | IPR001878 |
| Pfam | PF00665 | Integrase core domain | 1536 | 1633 | 8.1E-13 | IPR001584 |
| Pfam | PF13976 | GAG-pre-integrase domain | 1472 | 1519 | 5.3E-15 | IPR025724 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 1866 | 2310 | 1.33E-19 | IPR043502 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 1531 | 1689 | 1.05E-42 | IPR012337 |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 1271 | 1308 | 3.14E-8 | IPR036875 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 15 | 394 | 9.56E-115 | IPR027417 |
| Gene3D | G3DSA:4.10.60.10 | - | 1258 | 1319 | 2.5E-7 | - |
| Gene3D | G3DSA:3.30.420.10 | - | 2197 | 2338 | 2.9E-5 | IPR036397 |
| Gene3D | G3DSA:3.30.420.10 | - | 1527 | 1715 | 2.0E-43 | IPR036397 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 6 | 356 | 2.0E-125 | IPR036961 |
| SMART | SM00343 | c2hcfinal6 | 1289 | 1305 | 0.0033 | IPR001878 |
| SMART | SM00129 | kinesin_4 | 12 | 357 | 9.9E-139 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 14 | 349 | 110.03273 | IPR001752 |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. | 1290 | 1305 | 8.795613 | IPR001878 |
| ProSiteProfiles | PS50994 | Integrase catalytic domain profile. | 1519 | 1695 | 22.144388 | IPR001584 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 245 | 256 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 97 | 118 | 3.7E-35 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 299 | 320 | 3.7E-35 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 213 | 230 | 3.7E-35 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 246 | 264 | 3.7E-35 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 790 | 808 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 787 | 808 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1252 | 1282 | - | - |
| Coils | Coil | Coil | 491 | 511 | - | - |
| Coils | Coil | Coil | 364 | 391 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49650.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 5.34E-287 |
| RefSeq | XP_025795138.1 | kinesin-like protein KIN-8B [Panicum hallii] | 0 |
| Q10E64 | Kinesin-like protein KIN-8B OS=Oryza sativa subsp. japonica OX=39947 GN=KIN8B PE=2 SV=1 | 0 | |
| TrEMBL | A0A3E1AY21 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Rhizobium leguminosarum bv. trifolii OX=386 GN=B5K11_35805 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg19607 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_23667 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00010372 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30204340 |
| Apiaceae | Apium graveolens | 1 | Ag4G01186 |
| Arecaceae | Cocos nucifera | 1 | scaffold012196G000010 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103705708 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.720.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G00939 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G49650.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10010126m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g12430.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB06g010150.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G0412 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno01g14200 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0104s00013.v1.0, Dusal.0430s00008.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g31680 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.2636 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00024141 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb4G24625, Lb8G36215 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.60, BH01.581, CH01.558 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0513780.1 |
| Poaceae | Oryza coarctata | 2 | Oco05G024820, Oco06G025740 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g56260.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G065000 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0106938, Pt_Chr0107413 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr04G029640, Chr07G028720 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G642900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG059140, gene_TRIDC5BG063320 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G407400.1, TraesCS5B02G412300.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb059040_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-10762, nbis-gene-16328 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g2672, Zma_g378 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG07.966, evm.TU.LG15.886 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g26810 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_3_RagTag.1161 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-813 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-17637 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-2414 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000019l.543 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00002045 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-6172 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-1852, nbisL1-mrna-1853 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132621755 |
| Solanaceae | Solanum chilense | 1 | SOLCI004025100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107011468 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_15585 |
| Tamaricaceae | Tamarix chinensis | 1 | TC09G0296 |