Basic Information
Locus ID:
BH01.5250
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
NAC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 55247942 | 55248950 | + | BH01.5250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.24 | 23,802.85 Da | 56.22 | 69.46 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 184 | 220 | 2.16854E-17 | - |
| Pfam | PF19026 | HYPK UBA domain | 182 | 220 | 2.6E-12 | IPR044034 |
| Pfam | PF01849 | NAC domain | 81 | 136 | 3.9E-21 | IPR002715 |
| Gene3D | G3DSA:1.10.8.10 | - | 182 | 219 | 1.4E-19 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 87 | 140 | 1.3E-30 | IPR038187 |
| SMART | SM01407 | NAC_2 | 81 | 137 | 1.5E-24 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 78 | 143 | 17.74539 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 67 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49470.1 | nascent polypeptide-associated complex subunit alpha-like protein 2. | 5.05E-67 |
| RefSeq | XP_039829624.1 | nascent polypeptide-associated complex subunit alpha-like protein 2 [Panicum virgatum] | 1.91E-106 |
| Q94JX9 | Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At3g49470 PE=2 SV=2 | 4.86E-66 | |
| TrEMBL | A0A8T0N6Z8 | NAC-A/B domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_9NG777200 PE=4 SV=1 | 4.32E-105 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology