Basic Information
Locus ID:
BH01.5239
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 55119765 | 55121399 | + | BH01.5239 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 57,835.75 Da | 32.45 | 102.81 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 527 | 541 | 1.2 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 69 | 1.3E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 80 | 137 | 8.2E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 293 | 352 | 4.2E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 293 | 543 | 4.76E-37 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 59 | 381 | 1.6E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 478 | 544 | 2.2E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 193 | 5.6E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 393 | 477 | 2.6E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 194 | 391 | 3.1E-48 | IPR032675 |
| SMART | SM00365 | LRR_sd22_2 | 124 | 150 | 160.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 291 | 320 | 87.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 244 | 276 | 190.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 502 | 528 | 61.0 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 291 | 304 | 2.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 127 | 140 | 2.9E-5 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 6.18E-8 |
| RefSeq | XP_039806376.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Panicum virgatum] | 4.98E-111 |
| TrEMBL | A0A8T0TBW1 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4NG061843 PE=3 SV=1 | 4.97E-111 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology