Basic Information
Locus ID:
BH01.5177
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 54459121 | 54464851 | + | BH01.5177 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 94,921.62 Da | 45.48 | 75.01 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07876 | Stress responsive A/B Barrel Domain | 637 | 713 | 2.0E-6 | IPR013097 |
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 481 | 597 | 7.0E-10 | IPR001525 |
| SUPERFAMILY | SSF54909 | Dimeric alpha+beta barrel | 746 | 846 | 7.11E-9 | IPR011008 |
| SUPERFAMILY | SSF54909 | Dimeric alpha+beta barrel | 636 | 733 | 7.37E-10 | IPR011008 |
| SUPERFAMILY | SSF46934 | UBA-like | 143 | 189 | 2.82E-5 | IPR009060 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 480 | 595 | 1.28E-18 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 285 | 477 | 3.65E-25 | IPR029063 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 447 | 613 | 3.0E-28 | - |
| Gene3D | G3DSA:3.30.70.100 | - | 634 | 731 | 4.4E-9 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 51 | 101 | 3.5E-7 | - |
| Gene3D | G3DSA:3.30.70.100 | - | 740 | 842 | 5.0E-6 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 283 | 376 | 1.9E-6 | - |
| SMART | SM00886 | Dabb_2 | 637 | 726 | 1.3E-5 | IPR013097 |
| SMART | SM00886 | Dabb_2 | 746 | 841 | 0.076 | IPR013097 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 158 | 202 | 10.016698 | IPR015940 |
| ProSiteProfiles | PS51502 | Stress-response A/B barrel domain profile. | 637 | 736 | 17.422493 | IPR013097 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 58 | 99 | 9.872116 | IPR015940 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 277 | 603 | 131.83638 | IPR030380 |
| ProSiteProfiles | PS51502 | Stress-response A/B barrel domain profile. | 746 | 839 | 15.592908 | IPR013097 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 258 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 4.29E-175 |
| RefSeq | XP_004986027.1 | DNA (cytosine-5)-methyltransferase DRM2 [Setaria italica] | 0 |
| Q10SU5 | DNA (cytosine-5)-methyltransferase DRM2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRM2 PE=1 SV=1 | 1.13E-291 | |
| TrEMBL | A0A6G1F7M3 | DNA (Cytosine-5)-methyltransferase DRM2 OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_012184 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology