Basic Information
Locus ID:
BH01.5123
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 53983280 | 54000447 | + | BH01.5123 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.40 | 149,559.31 Da | 47.44 | 86.02 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00165 | S4 | 167 | 234 | 4.08172E-10 | IPR002942 |
| CDD | cd02870 | PseudoU_synth_RsuA_like | 230 | 387 | 8.76144E-43 | - |
| CDD | cd00106 | KISc | 522 | 862 | 2.33444E-120 | - |
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 1148 | 1185 | 1.2E-5 | IPR000225 |
| Pfam | PF00849 | RNA pseudouridylate synthase | 230 | 372 | 3.0E-17 | IPR006145 |
| Pfam | PF01479 | S4 domain | 167 | 208 | 3.4E-12 | IPR002942 |
| Pfam | PF00225 | Kinesin motor domain | 528 | 864 | 7.4E-96 | IPR001752 |
| SUPERFAMILY | SSF55174 | Alpha-L RNA-binding motif | 158 | 251 | 5.23E-17 | - |
| SUPERFAMILY | SSF55120 | Pseudouridine synthase | 228 | 403 | 1.14E-30 | IPR020103 |
| SUPERFAMILY | SSF48371 | ARM repeat | 1097 | 1356 | 3.73E-32 | IPR016024 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 522 | 902 | 1.26E-100 | IPR027417 |
| Gene3D | G3DSA:3.10.290.10 | - | 162 | 224 | 3.4E-18 | IPR036986 |
| Gene3D | G3DSA:1.25.10.10 | - | 1092 | 1275 | 9.6E-29 | IPR011989 |
| Gene3D | G3DSA:3.30.70.580 | - | 230 | 397 | 1.4E-43 | IPR020094 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 515 | 895 | 2.5E-112 | IPR036961 |
| Gene3D | G3DSA:1.25.10.10 | - | 1276 | 1363 | 7.3E-6 | IPR011989 |
| Gene3D | G3DSA:3.30.70.1560 | - | 306 | 391 | 1.4E-43 | IPR042092 |
| SMART | SM00185 | arm_5 | 1104 | 1144 | 320.0 | IPR000225 |
| SMART | SM00363 | s4_6 | 167 | 226 | 2.7E-13 | IPR002942 |
| SMART | SM00185 | arm_5 | 1229 | 1269 | 7.0 | IPR000225 |
| SMART | SM00185 | arm_5 | 1187 | 1228 | 96.0 | IPR000225 |
| SMART | SM00129 | kinesin_4 | 520 | 872 | 5.6E-112 | IPR001752 |
| SMART | SM00185 | arm_5 | 1145 | 1186 | 0.036 | IPR000225 |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 1115 | 1157 | 11.1124 | IPR000225 |
| ProSiteProfiles | PS50889 | S4 RNA-binding domain profile. | 167 | 236 | 14.65749 | - |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 1156 | 1199 | 13.0724 | IPR000225 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 522 | 864 | 108.0606 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 764 | 775 | - | IPR019821 |
| ProSitePatterns | PS01149 | Rsu family of pseudouridine synthase signature. | 277 | 291 | - | IPR018496 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 814 | 835 | 5.1E-27 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 598 | 619 | 5.1E-27 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 765 | 783 | 5.1E-27 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 479 | 522 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 412 | 432 | - | - |
| Coils | Coil | Coil | 873 | 907 | - | - |
| Coils | Coil | Coil | 101 | 121 | - | - |
| Coils | Coil | Coil | 1036 | 1056 | - | - |
| Coils | Coil | Coil | 990 | 1028 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54870.2 | - | 2.3E-237 |
| RefSeq | XP_039830085.1 | kinesin-like protein KIN-UA isoform X7 [Panicum virgatum] | 0 |
| Q0DV28 | Kinesin-like protein KIN-UA OS=Oryza sativa subsp. japonica OX=39947 GN=KINUA PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T0N5N8 | Kinesin-like protein OS=Panicum virgatum OX=38727 GN=PVAP13_9NG743800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg34362 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_18540 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah025441 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_4g079150, BVRB_6g142930 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg12892, Sbi_jg52978 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg8879 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017701 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl32899, Sgl38239 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000000106, gene:ENSEOMG00000000156 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0013090, CQ.Regalona.r1.6BG0013840 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30170710 |
| Apiaceae | Apium graveolens | 1 | Ag11G03754 |
| Arecaceae | Cocos nucifera | 1 | COCNU_07G010960 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103720767 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_10.1564.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri17G33780 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT2G39140.1, AT3G43340.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10016747m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g21490.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB06g005590.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G0563 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno14g04220 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0459s00006.v1.0, Dusal.0755s00004.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g06860 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.1085 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00035041 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G05292 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.4939, BH01.4875, BH01.5123 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0234110, gene-QOZ80_3BG0293890 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0400870.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_070677 |
| Poaceae | Oryza coarctata | 2 | Oco05G003210, Oco06G003230 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g05806.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G477400 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0103097, Pt_Chr0601943 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr04G003940, Chr04G004260, Chr07G007270 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G454900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG005060, gene_TRIDC4BG046640 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G036500.1, TraesCS4B02G269400.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb004240_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-2873 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g2047 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG03.1902, evm.TU.LG14.193 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc06g01220 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_4_RagTag.1593 |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-26148, nbisL1-mrna-26150, nbisL1-mrna-26151 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-7182 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-4414 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000008l.871 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00000227 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-2181 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-9576 |
| Salicaceae | Populus euphratica | 2 | populus_peu06232, populus_peu20068 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132614208 |
| Solanaceae | Solanum chilense | 1 | SOLCI003201000 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107004655 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_13342 |
| Tamaricaceae | Tamarix chinensis | 1 | TC11G1552 |
| Zosteraceae | Zostera marina | 1 | Zosma03g16070.v3.1 |