Basic Information
Locus ID:
BH01.5066
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 53492257 | 53495588 | - | BH01.5066 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 56,455.89 Da | 46.58 | 84.88 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 205 | 471 | 8.7467E-103 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 202 | 470 | 2.0E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 179 | 473 | 3.86E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 173 | 274 | 2.0E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 275 | 484 | 1.6E-64 | - |
| SMART | SM00220 | serkin_6 | 199 | 477 | 4.8E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 199 | 476 | 37.869946 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 205 | 227 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 321 | 333 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 146 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 128 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 484 | 508 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.2 | Protein kinase superfamily protein. | 1.92E-197 |
| RefSeq | XP_039825095.1 | probable serine/threonine-protein kinase At1g01540 [Panicum virgatum] | 4.24E-306 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 1.84E-196 | |
| TrEMBL | A0A8T0N6V8 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_9NG772900 PE=4 SV=1 | 9.59E-305 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology