Basic Information
Locus ID:
BH01.5050
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 53380645 | 53385659 | - | BH01.5050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 133,064.45 Da | 45.26 | 94.17 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 158 | 196 | 2.7E-12 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 251 | 312 | 2.2E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 736 | 946 | 3.9E-34 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 189 | 391 | 6.8E-29 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 732 | 952 | 2.19E-57 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 317 | 633 | 8.05E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 709 | 807 | 1.6E-14 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 153 | 220 | 1.5E-9 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 808 | 1007 | 3.8E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 221 | 643 | 6.1E-116 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 731 | 1031 | 32.513161 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1161 | 1176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1161 | 1185 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12460.2 | - | 3.43E-126 |
| RefSeq | XP_004985881.1 | probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Setaria italica] | 5.11E-295 |
| C0LGE4 | Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana OX=3702 GN=At1g12460 PE=1 SV=1 | 1.22E-123 | |
| TrEMBL | A0A811MJI9 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS5562 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg2377 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_3150 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah019046 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg15404, Sbi_jg56215 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg26681 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00020295 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl02122, Sgl07273 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000001679, gene:ENSEOMG00000031145 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0001710, CQ.Regalona.r1.3BG0001760 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30181600 |
| Apiaceae | Apium graveolens | 2 | Ag2G01936, Ag3G02300 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103700128 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_10.594.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri8G21535 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G51680.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10014011m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g13900.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g029070.2N, BniB05g059890.2N |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g07390 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2265 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00012546, Pov_00040847 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb1G07862, Lb1G07867, Lb1G07874 |
| Poaceae | Echinochloa crus-galli | 2 | BH01.5050, BH01.5299 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0232060, gene-QOZ80_3BG0295880 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0410800.1 |
| Poaceae | Oryza coarctata | 2 | Oco05G001650, Oco06G001630 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G496700 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr01G038410, Chr07G005970, Chr12G001010 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G528500 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5AG069960 |
| Poaceae | Triticum aestivum | 3 | TraesCS4B02G320700.1, TraesCS4D02G317200.2 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-3063, nbis-gene-4645 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g2174, Zma_g4520 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG01.1345, evm.TU.LG11.1555, evm.TU.LG14.636 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc09g01640 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_4_RagTag.198 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-6839 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000008l.120 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-17664 |
| Salicaceae | Populus euphratica | 1 | populus_peu29179 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132631772 |
| Solanaceae | Solanum chilense | 1 | SOLCI005348900 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107015198 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_2491 |
| Tamaricaceae | Tamarix chinensis | 2 | TC05G0280, TC06G1942 |
| Zosteraceae | Zostera marina | 1 | Zosma05g00660.v3.1 |