Basic Information
Locus ID:
BH01.4927
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 52421212 | 52424454 | + | BH01.4927 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 109,851.55 Da | 32.85 | 101.62 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 271 | 331 | 4.3E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 536 | 595 | 1.0E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 722 | 1004 | 8.8E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 76 | 2.7E-12 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 83 | 403 | 1.33E-66 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 334 | 607 | 9.18E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 717 | 1007 | 4.65E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 710 | 810 | 1.1E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 388 | 628 | 1.5E-64 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 150 | 221 | 8.1E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 222 | 387 | 6.8E-55 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 149 | 3.9E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 811 | 1030 | 1.9E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 294 | 318 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 558 | 582 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 463 | 486 | 230.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 720 | 1007 | 1.2E-28 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 198 | 222 | 8.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 438 | 462 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 342 | 366 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 126 | 150 | 360.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 720 | 1014 | 36.414143 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 857 | 869 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 726 | 750 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 3.86E-167 |
| RefSeq | XP_034575566.1 | MDIS1-interacting receptor like kinase 1-like [Setaria viridis] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 3.73E-166 | |
| TrEMBL | A0A4U6T8P3 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_9G546800v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology