Basic Information
Locus ID:
BH01.4543
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 49385126 | 49386418 | - | BH01.4543 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.62 | 44,031.35 Da | 47.81 | 98.30 | 0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 72 | 6.8E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 128 | 174 | 7.6E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 103 | 394 | 1.36E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 211 | 8.4E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 212 | 398 | 3.3E-28 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 8.0E-43 |
| RefSeq | XP_025812959.1 | leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 [Panicum hallii] | 1.33E-229 |
| F4KHA2 | Receptor-like protein 54 OS=Arabidopsis thaliana OX=3702 GN=RLP54 PE=3 SV=1 | 2.6E-6 | |
| TrEMBL | A0A2T8JDC7 | LRRNT_2 domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_4G189700 PE=4 SV=1 | 3.01E-228 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology