Basic Information
Locus ID:
BH01.4111
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 45668833 | 45673489 | - | BH01.4111 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 106,062.59 Da | 36.42 | 83.18 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 647 | 912 | 8.28772E-90 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 645 | 910 | 3.2E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 626 | 918 | 3.42E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 297 | 410 | 7.82E-8 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 312 | 6.69E-47 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 717 | 933 | 5.7E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 196 | 412 | 1.4E-33 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 613 | 716 | 3.7E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 195 | 6.3E-39 | IPR032675 |
| SMART | SM00220 | serkin_6 | 641 | 914 | 1.2E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 641 | 915 | 38.195026 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 647 | 669 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 761 | 773 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 919 | 935 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 919 | 957 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025794364.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Panicum hallii] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 3.1E-234 | |
| TrEMBL | A0A3L6SE78 | Protein kinase domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM02G27210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology