Basic Information
Locus ID:
BH01.4023
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Phloem protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 44974601 | 44976472 | + | BH01.4023 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 31,870.40 Da | 50.25 | 72.64 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 12 | 53 | 4.8E-5 | IPR001810 |
| Pfam | PF14299 | Phloem protein 2 | 107 | 294 | 2.5E-35 | IPR025886 |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 59 | 8.37E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 85 | 5.7E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 222 | 244 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02360.1 | phloem protein 2-B10. | 1.36E-42 |
| RefSeq | XP_025792086.1 | putative F-box protein PP2-B8 [Panicum hallii] | 1.22E-168 |
| Q9ZVQ6 | F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1 | 1.32E-41 | |
| TrEMBL | A0A3L6SBE3 | Putative F-box protein PP2-B8 OS=Panicum miliaceum OX=4540 GN=C2845_PM02G26490 PE=4 SV=1 | 2.77E-167 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology