Basic Information
Locus ID:
BH01.3976
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
NAC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 44580996 | 44583326 | - | BH01.3976 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.29 | 22,483.51 Da | 45.89 | 73.27 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 168 | 204 | 4.70286E-17 | - |
| Pfam | PF01849 | NAC domain | 65 | 120 | 8.0E-23 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 165 | 204 | 5.7E-12 | IPR044034 |
| Gene3D | G3DSA:1.10.8.10 | - | 166 | 203 | 6.9E-19 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 71 | 124 | 8.2E-32 | IPR038187 |
| SMART | SM01407 | NAC_2 | 65 | 121 | 1.7E-26 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 62 | 127 | 17.778694 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 167 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 50 | - | - |
| Coils | Coil | Coil | 3 | 35 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 1.83E-79 |
| RefSeq | XP_004981809.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Setaria italica] | 2.18E-110 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 1.76E-78 | |
| TrEMBL | A0A2T7CCM4 | NAC-A/B domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G475500 PE=4 SV=1 | 1.22E-109 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology