HalophFGD

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Basic Information
Locus ID: BH01.3663
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: Epidermal growth factor-like domain.
Maps and Mapping Data
Chromosome Start End Strand ID
BH01 41539083 41544188 + BH01.3663
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.89 119,294.50 Da 51.60 81.47 -0.15
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd14066 STKc_IRAK 570 838 6.89363E-83 -
CDD cd00054 EGF_CA 441 468 1.3185E-6 -
Pfam PF13947 Wall-associated receptor kinase galacturonan-binding 301 358 1.5E-10 IPR025287
Pfam PF13947 Wall-associated receptor kinase galacturonan-binding 31 77 1.4E-8 IPR025287
Pfam PF07714 Protein tyrosine and serine/threonine kinase 567 832 1.9E-43 IPR001245
SUPERFAMILY SSF57184 Growth factor receptor domain 404 479 2.9E-9 IPR009030
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 549 844 2.87E-74 IPR011009
Gene3D G3DSA:2.10.25.10 Laminin 401 444 1.5E-5 -
Gene3D G3DSA:2.10.25.10 Laminin 445 481 1.8E-7 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 529 639 1.4E-31 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 640 859 2.9E-53 -
SMART SM00179 egfca_6 441 479 2.0E-4 IPR001881
SMART SM00220 serkin_6 564 838 3.6E-27 IPR000719
SMART SM00181 egf_5 444 479 35.0 IPR000742
SMART SM00181 egf_5 243 290 28.0 IPR000742
SMART SM00181 egf_5 403 440 18.0 IPR000742
ProSiteProfiles PS50011 Protein kinase domain profile. 564 838 36.696823 IPR000719
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 570 592 - IPR017441
ProSitePatterns PS01187 Calcium-binding EGF-like domain signature. 441 464 - IPR018097
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 686 698 - IPR008271
MobiDBLite mobidb-lite consensus disorder prediction 993 1013 - -
MobiDBLite mobidb-lite consensus disorder prediction 846 865 - -
MobiDBLite mobidb-lite consensus disorder prediction 999 1013 - -
MobiDBLite mobidb-lite consensus disorder prediction 1063 1091 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005509 (calcium ion binding) GO:0005524 (ATP binding) GO:0030247 (polysaccharide binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G21230.1 wall associated kinase 5. encodes a wall-associated kinase 2.19E-122
RefSeq XP_025795388.1 wall-associated receptor kinase 3-like [Panicum hallii] 0
Swiss-Prot Q9LMN7 Wall-associated receptor kinase 5 OS=Arabidopsis thaliana OX=3702 GN=WAK5 PE=2 SV=1 2.12E-121
TrEMBL K4A5I8 Protein kinase domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 6 AH01.3275, BH01.3663, CH01.3846, CH01.3847, CH02.1873 ...
CH02.1876
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.5HG0531690.1
Poaceae Lolium multiflorum 2 gene-QYE76_059598, gene-QYE76_060264
Poaceae Oryza coarctata 3 Oco01G010200, Oco05G028540, Oco06G029580
Poaceae Oryza sativa 1 LOC_Os03g62430.1
Poaceae Paspalum vaginatum 1 gene-BS78_01G320700
Poaceae Puccinellia tenuiflora 2 Pt_Chr0105226, Pt_Chr0106279
Poaceae Thinopyrum elongatum 1 Tel5E01G818100
Poaceae Triticum dicoccoides 2 gene_TRIDC4AG052310, gene_TRIDC5BG078330
Poaceae Triticum aestivum 3 TraesCS4A02G347600.1, TraesCS5B02G526000.1 ...
TraesCS5D02G524800.1
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