Basic Information
Locus ID:
BH01.3638
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
WRKY4
Description:
DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 41278742 | 41284210 | - | BH01.3638 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.81 | 52,268.50 Da | 63.99 | 55.04 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 384 | 440 | 3.4E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 215 | 271 | 2.2E-24 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 213 | 273 | 5.23E-25 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 375 | 443 | 2.75E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 368 | 444 | 2.7E-35 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 200 | 274 | 1.7E-27 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 383 | 442 | 6.7E-39 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 214 | 272 | 1.1E-33 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 215 | 273 | 23.789268 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 378 | 443 | 37.171917 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 496 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 364 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 450 | 489 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 282 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 6.92E-103 |
| RefSeq | XP_039829141.1 | probable WRKY transcription factor 4 isoform X1 [Panicum virgatum] | 3.86E-286 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 6.68E-102 | |
| TrEMBL | A0A8T0MS54 | WRKY transcription factor 4 OS=Panicum virgatum OX=38727 GN=PVAP13_9NG515600 PE=4 SV=1 | 8.72E-285 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology