Basic Information
Locus ID:
BH01.3624
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 41093737 | 41094324 | - | BH01.3624 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 19,661.08 Da | 34.10 | 68.15 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 34 | 193 | 2.13999E-64 | - |
| Pfam | PF00314 | Thaumatin family | 38 | 180 | 2.8E-32 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 31 | 194 | 7.98E-46 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 32 | 193 | 2.0E-45 | IPR037176 |
| SMART | SM00205 | tha2 | 34 | 193 | 1.9E-27 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 171 | 195 | 3.5 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 2 | 175 | 8.6E-43 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 31 | 193 | 27.902943 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 53 | 62 | 2.1E-27 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 75 | 86 | 2.1E-27 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 33 | 45 | 2.1E-27 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 183 | 192 | 2.1E-27 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 87 | 116 | 2.1E-27 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 7.36E-35 |
| RefSeq | XP_025809288.1 | thaumatin-like pathogenesis-related protein 3 [Panicum hallii] | 3.28E-105 |
| P50698 | Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa OX=4498 GN=RASTL-4 PE=2 SV=1 | 2.2E-59 | |
| TrEMBL | A0A2S3HG34 | Thaumatin-like protein OS=Panicum hallii OX=206008 GN=PAHAL_3G506700 PE=4 SV=1 | 7.43E-104 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology