Basic Information
Locus ID:
BH01.3574
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
DDE superfamily endonuclease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 40738966 | 40743590 | - | BH01.3574 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 84,998.85 Da | 49.65 | 56.34 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13359 | DDE superfamily endonuclease | 708 | 765 | 5.9E-8 | IPR027806 |
| Pfam | PF12776 | Myb/SANT-like DNA-binding domain | 276 | 370 | 4.4E-6 | IPR024752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 270 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 480 | - | - |
| Coils | Coil | Coil | 12 | 32 | - | - |
| Coils | Coil | Coil | 529 | 559 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025806733.1 | uncharacterized protein LOC112885298 [Panicum hallii] | 7.01E-69 |
| TrEMBL | A0A3L6TQ14 | Myb_DNA-bind_3 domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM01G33420 PE=4 SV=1 | 7.46E-72 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||