Basic Information
Locus ID:
BH01.353
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Leukotriene A4 hydrolase, C-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 3253660 | 3265423 | - | BH01.353 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 184,618.38 Da | 45.53 | 87.07 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09599 | M1_LTA4H | 1051 | 1500 | 0.0 | IPR034015 |
| Pfam | PF12937 | F-box-like | 16 | 55 | 5.7E-6 | IPR001810 |
| Pfam | PF09127 | Leukotriene A4 hydrolase, C-terminal | 1541 | 1653 | 2.7E-28 | IPR015211 |
| Pfam | PF01433 | Peptidase family M1 domain | 1295 | 1486 | 1.0E-40 | IPR014782 |
| Pfam | PF12937 | F-box-like | 506 | 541 | 2.8E-6 | IPR001810 |
| Pfam | PF17900 | Peptidase M1 N-terminal domain | 1068 | 1213 | 1.8E-10 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 1522 | 1653 | 3.05E-32 | IPR016024 |
| SUPERFAMILY | SSF81383 | F-box domain | 498 | 561 | 7.33E-11 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 55 | 2.75E-8 | IPR036047 |
| SUPERFAMILY | SSF63737 | Leukotriene A4 hydrolase N-terminal domain | 1049 | 1261 | 1.57E-28 | IPR042097 |
| SUPERFAMILY | SSF55486 | "Metalloproteases (""zincins""), catalytic domain" | 1269 | 1506 | 1.47E-59 | - |
| Gene3D | G3DSA:2.60.40.1730 | tricorn interacting facor f3 domain | 1062 | 1261 | 1.1E-31 | IPR042097 |
| Gene3D | G3DSA:1.25.40.320 | - | 1514 | 1654 | 2.3E-38 | IPR038502 |
| Gene3D | G3DSA:1.10.390.10 | Neutral Protease Domain 2 | 1361 | 1510 | 2.7E-34 | IPR027268 |
| Gene3D | G3DSA:3.30.2010.30 | - | 1263 | 1360 | 4.4E-39 | - |
| SMART | SM00256 | fbox_2 | 18 | 59 | 0.88 | IPR001810 |
| SMART | SM00256 | fbox_2 | 508 | 549 | 1.8E-4 | IPR001810 |
| SMART | SM01263 | Leuk_A4_hydro_C_2 | 1515 | 1653 | 8.2E-43 | IPR015211 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 12 | 59 | 8.941087 | IPR001810 |
| PRINTS | PR00756 | Membrane alanyl dipeptidase (M1) family signature | 1182 | 1197 | 6.9E-13 | IPR001930 |
| PRINTS | PR00756 | Membrane alanyl dipeptidase (M1) family signature | 1367 | 1379 | 6.9E-13 | IPR001930 |
| PRINTS | PR00756 | Membrane alanyl dipeptidase (M1) family signature | 1321 | 1331 | 6.9E-13 | IPR001930 |
| PRINTS | PR00756 | Membrane alanyl dipeptidase (M1) family signature | 1348 | 1363 | 6.9E-13 | IPR001930 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1001 | 1046 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1001 | 1023 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13520.1 | peptidase M1 family protein. | 3.98E-280 |
| RefSeq | XP_004981267.1 | leukotriene A-4 hydrolase homolog [Setaria italica] | 0 |
| Q84TA3 | Leucine aminopeptidase OS=Oryza sativa subsp. japonica OX=39947 GN=LKHA4 PE=2 SV=1 | 0 | |
| TrEMBL | K4A796 | Leuk-A4-hydro_C domain-containing protein OS=Setaria italica OX=4555 GN=101770400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH01.373, AH01.374, BH01.353, BH04.2047 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_3BG0255800, gene-QOZ80_4AG0323620 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_027022, gene-QYE76_060805 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G032600 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr30G013570, Chr30G013580 |
| Poaceae | Thinopyrum elongatum | 2 | Tel5E01G752700, Tel5E01G752800 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5BG073010 |
| Poaceae | Triticum aestivum | 10 | TraesCS5A02G473900.1.cds1, TraesCS5A02G474000.1.cds1 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-8105 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g21049 |