Basic Information
Locus ID:
BH01.2957
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 33520279 | 33521774 | - | BH01.2957 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.61 | 35,669.47 Da | 51.03 | 84.49 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002467378.1 | uncharacterized protein LOC8083603 [Sorghum bicolor] | 1.8E-89 |
| TrEMBL | C5WPS9 | F-box domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3001G272700 PE=4 SV=1 | 4.08E-88 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH01.2957, CH01.3154 |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_1AG0034520, gene-QOZ80_5AG0375060 ... |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G194300 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr01G021480, Chr02G008650, Chr05G024830, Chr08G017020 ... |
| Poaceae | Zea mays | 2 | Zm00001eb224500_P001, Zm00001eb224510_P001 |
| Poaceae | Zoysia japonica | 5 | nbis-gene-23678, nbis-gene-23679, nbis-gene-23680 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g28150, Zma_g28151 |