Basic Information
Locus ID:
BH01.2635
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 26199833 | 26204789 | + | BH01.2635 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 78,289.50 Da | 44.21 | 84.78 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 423 | 691 | 3.99358E-88 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 72 | 2.1E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 419 | 688 | 5.8E-39 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 147 | 207 | 8.9E-12 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 245 | 4.0E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 401 | 688 | 4.99E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 496 | 712 | 3.2E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 382 | 494 | 4.6E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 271 | 1.2E-48 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 194 | 216 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 97 | 123 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 170 | 193 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 146 | 169 | 77.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 417 | 691 | 34.336445 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 196 | 218 | 8.096991 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 289 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 3.39E-234 |
| RefSeq | XP_025795961.1 | protein STRUBBELIG-RECEPTOR FAMILY 6-like [Panicum hallii] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 3.26E-233 | |
| TrEMBL | A0A2S3IMC5 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_9G290900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology