Basic Information
Locus ID:
BH01.2596
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 25170890 | 25173541 | + | BH01.2596 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 67,434.95 Da | 50.89 | 68.04 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08268 | F-box associated domain | 417 | 507 | 3.6E-8 | IPR013187 |
| Pfam | PF00646 | F-box domain | 120 | 157 | 5.3E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 119 | 174 | 2.75E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 120 | 157 | 1.4E-8 | - |
| SMART | SM00256 | fbox_2 | 121 | 160 | 5.9E-8 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 387 | 505 | 1.0E-15 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 115 | 160 | 9.868391 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 276 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G14315.2 | F-box and associated interaction domains-containing protein. | 1.63E-8 |
| RefSeq | XP_006662318.2 | F-box/LRR-repeat protein At2g43260-like [Oryza brachyantha] | 5.84E-84 |
| Q9LPW2 | Putative F-box/kelch-repeat protein At1g12870 OS=Arabidopsis thaliana OX=3702 GN=At1g12870 PE=4 SV=2 | 3.29E-6 | |
| TrEMBL | A0A3L6S6H8 | F-box/LRR-repeat protein OS=Panicum miliaceum OX=4540 GN=C2845_PM02G15140 PE=4 SV=1 | 2.06E-158 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology