Basic Information
Locus ID:
BH01.2241
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
snRNA processing
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 20523931 | 20525255 | - | BH01.2241 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.05 | 19,755.16 Da | 43.97 | 105.08 | 0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 119 | 152 | 8.9E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 115 | 166 | 6.15E-11 | IPR036047 |
| SUPERFAMILY | SSF48371 | ARM repeat | 19 | 119 | 1.55E-5 | IPR016024 |
| Gene3D | G3DSA:1.20.1280.50 | - | 111 | 163 | 1.8E-7 | - |
| SMART | SM00256 | fbox_2 | 118 | 158 | 3.5E-5 | IPR001810 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004984785.1 | protein SIEL isoform X6 [Setaria italica] | 1.55E-43 |
| TrEMBL | A0A4U6THJ2 | Cnd3 domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_9G451600v2 PE=4 SV=1 | 3.51E-42 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||