Basic Information
Locus ID:
BH01.2092
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Extension to Ser/Thr-type protein kinases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 18771180 | 18774672 | - | BH01.2092 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 65,082.78 Da | 45.21 | 66.48 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 111 | 478 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 116 | 414 | 5.1E-66 | IPR000719 |
| Pfam | PF00433 | Protein kinase C terminal domain | 433 | 477 | 7.4E-6 | IPR017892 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 92 | 464 | 2.43E-88 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 433 | 443 | 2.3E-44 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 197 | 264 | 4.1E-68 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 309 | 432 | 2.3E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 87 | 196 | 4.1E-68 | - |
| SMART | SM00133 | pkinase_C_6 | 415 | 479 | 4.0E-7 | IPR000961 |
| SMART | SM00220 | serkin_6 | 113 | 414 | 5.1E-106 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 113 | 414 | 48.442177 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 415 | 487 | 13.795546 | IPR000961 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 232 | 244 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 119 | 142 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 495 | 562 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 519 | 549 | - | - |
| Coils | Coil | Coil | 79 | 106 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03920.1 | Protein kinase family protein. | 4.09E-273 |
| RefSeq | XP_025796731.1 | serine/threonine-protein kinase tricorner-like isoform X1 [Panicum hallii] | 0 |
| Q6TGC6 | Serine/threonine-protein kinase CBK1 OS=Pneumocystis carinii OX=4754 GN=CBK1 PE=2 SV=1 | 3.18E-140 | |
| TrEMBL | A0A8T0MRZ2 | Non-specific serine/threonine protein kinase OS=Panicum virgatum OX=38727 GN=PVAP13_9NG305000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology