Basic Information
Locus ID:
BH01.1971
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 17449947 | 17450968 | - | BH01.1971 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.23 | 32,517.69 Da | 46.02 | 89.86 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 23 | 127 | 1.88434E-10 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 137 | 226 | 2.4E-14 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 23 | 130 | 1.23E-12 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 137 | 227 | 1.71E-16 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 19 | 127 | 4.0E-11 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 128 | 235 | 3.1E-20 | IPR011333 |
| SMART | SM00225 | BTB_4 | 142 | 237 | 3.9E-9 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 142 | 211 | 14.211579 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.2 | BTB/POZ/MATH-domains containing protein. | 5.98E-22 |
| RefSeq | XP_004986481.2 | BTB/POZ and MATH domain-containing protein 1 [Setaria italica] | 7.31E-103 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 5.92E-21 | |
| TrEMBL | A0A1E5UIW4 | BTB/POZ and MATH domain-containing protein 1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0026225 PE=4 SV=1 | 3.27E-107 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH01.1971 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_2AG0111690 |
| Poaceae | Paspalum vaginatum | 11 | gene-BS78_01G192700, gene-BS78_01G193000, gene-BS78_K188700 ... |