Basic Information
Locus ID:
BH01.1925
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 17059018 | 17062683 | - | BH01.1925 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.73 | 93,039.17 Da | 68.69 | 72.31 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 497 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 486 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 559 | 600 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 565 | 586 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 615 | 668 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 82 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 82 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 757 | 784 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 841 | 878 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 744 | 784 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 625 | 660 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025791633.1 | uncharacterized protein LOC112872804 [Panicum hallii] | 4.3E-34 |
| TrEMBL | A0A811SFW1 | Gnk2-homologous domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS64261 PE=4 SV=1 | 5.64E-39 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 11 | BH01.1925, BH01.1926, BH01.1953, BH01.1955, BH01.1965 ... |
| Poaceae | Eleusine coracana subsp. coracana | 8 | gene-QOZ80_2AG0111780, gene-QOZ80_2AG0111800 ... |
| Poaceae | Hordeum vulgare | 4 | HORVU.MOREX.r3.2HG0119700.1, HORVU.MOREX.r3.2HG0185770.1 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_035744, gene-QYE76_056188 |
| Poaceae | Oryza coarctata | 1 | Oco05G010260 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g56840.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G195400 |
| Poaceae | Puccinellia tenuiflora | 23 | Pt_Chr0200158, Pt_Chr0200181, Pt_Chr0301803, Pt_Chr0301818 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr09G001610 |
| Poaceae | Thinopyrum elongatum | 6 | Tel2E01G287500, Tel2E01G674800, Tel2E01G674900 ... |
| Poaceae | Triticum dicoccoides | 5 | gene_TRIDC2AG017710, gene_TRIDC2AG056830 ... |
| Poaceae | Triticum aestivum | 25 | TraesCS2A02G142100.1.cds1, TraesCS2A02G145100.1 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-27621 |