Basic Information
Locus ID:
BH01.1906
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Prolyl 4-hydroxylase alpha subunit homologues.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 16832088 | 16835637 | - | BH01.1906 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 34,349.86 Da | 51.29 | 81.55 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13640 | 2OG-Fe(II) oxygenase superfamily | 177 | 277 | 1.1E-14 | IPR044862 |
| Gene3D | G3DSA:2.60.120.620 | q2cbj1_9rhob like domain | 90 | 281 | 1.0E-70 | - |
| SMART | SM00702 | p4hc | 97 | 301 | 2.5E-48 | IPR006620 |
| ProSiteProfiles | PS51471 | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 173 | 312 | 9.675059 | IPR005123 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 83 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 83 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G20270.1 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. | 1.33E-120 |
| RefSeq | NP_001131953.1 | prolyl 4-hydroxylase 1 [Zea mays] | 1.08E-156 |
| Q9LN20 | Probable prolyl 4-hydroxylase 3 OS=Arabidopsis thaliana OX=3702 GN=P4H3 PE=2 SV=1 | 1.28E-119 | |
| TrEMBL | B4FEP9 | Prolyl 4-hydroxylase 1 OS=Zea mays OX=4577 GN=P4H1 PE=2 SV=1 | 2.45E-155 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology