Basic Information
Locus ID:
BH01.1692
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 14782083 | 14783790 | + | BH01.1692 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.27 | 45,722.80 Da | 49.78 | 90.57 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 90 | 144 | 1.86211E-7 | IPR001623 |
| Pfam | PF01554 | MatE | 323 | 422 | 9.1E-21 | IPR002528 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 89 | 146 | 1.15E-5 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 77 | 150 | 3.4E-6 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 89 | 147 | 3.8E-4 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 90 | 161 | 9.022801 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 209 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21690.1 | MATE efflux family protein. | 1.13E-39 |
| RefSeq | XP_034571803.1 | protein DETOXIFICATION 40-like [Setaria viridis] | 2.63E-56 |
| Q9LVD9 | Protein DETOXIFICATION 40 OS=Arabidopsis thaliana OX=3702 GN=DTX40 PE=1 SV=1 | 1.11E-38 | |
| TrEMBL | A0A4U6SW98 | Protein DETOXIFICATION OS=Setaria viridis OX=4556 GN=SEVIR_9G182200v2 PE=3 SV=1 | 1.61E-55 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology