Basic Information
Locus ID:
BH01.1501
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
NEK1
Description:
Kinase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 13106247 | 13109996 | + | BH01.1501 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.45 | 64,643.89 Da | 60.89 | 72.58 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 130 | 5.6E-25 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 131 | 225 | 4.9E-16 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 264 | 1.26E-63 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 78 | 3.7E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 131 | 255 | 1.1E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 79 | 130 | 5.0E-11 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 226 | 27.382517 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 32 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 490 | 524 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 464 | 524 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G54510.1 | NIMA-related serine/threonine kinase 1. Encodes AtNEK1, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 1.21E-159 |
| RefSeq | XP_012704302.1 | serine/threonine-protein kinase Nek1 isoform X2 [Setaria italica] | 0 |
| Q2QMH1 | Serine/threonine-protein kinase Nek2 OS=Oryza sativa subsp. japonica OX=39947 GN=NEK2 PE=2 SV=1 | 3.72E-254 | |
| TrEMBL | A0A4V6D0W4 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_9G160100v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology