Basic Information
Locus ID:
BH01.1465
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
C-terminus of AA_permease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 12796674 | 12798495 | + | BH01.1465 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.34 | 27,727.08 Da | 64.28 | 68.89 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13520 | Amino acid permease | 79 | 142 | 1.1E-6 | IPR002293 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 74 | 155 | 4.1E-16 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 261 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 183 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21120.1 | amino acid transporter 1. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. | 7.12E-56 |
| RefSeq | NP_001340098.1 | Cationic amino acid transporter 1 [Zea mays] | 6.63E-77 |
| Q84MA5 | Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1 | 6.97E-55 | |
| TrEMBL | A0A811MGH3 | AA_permease_C domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS3706 PE=4 SV=1 | 1.47E-75 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology