HalophFGD

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Basic Information
Locus ID: BH01.1446
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
BH01 12632252 12636803 - BH01.1446
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.05 163,125.52 Da 64.88 33.37 -1.87
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 557 577 - -
MobiDBLite mobidb-lite consensus disorder prediction 1469 1497 - -
MobiDBLite mobidb-lite consensus disorder prediction 1148 1164 - -
MobiDBLite mobidb-lite consensus disorder prediction 312 328 - -
MobiDBLite mobidb-lite consensus disorder prediction 1414 1430 - -
MobiDBLite mobidb-lite consensus disorder prediction 616 632 - -
MobiDBLite mobidb-lite consensus disorder prediction 1431 1451 - -
MobiDBLite mobidb-lite consensus disorder prediction 1393 1413 - -
MobiDBLite mobidb-lite consensus disorder prediction 1127 1147 - -
MobiDBLite mobidb-lite consensus disorder prediction 578 594 - -
MobiDBLite mobidb-lite consensus disorder prediction 1376 1392 - -
MobiDBLite mobidb-lite consensus disorder prediction 671 691 - -
MobiDBLite mobidb-lite consensus disorder prediction 329 349 - -
MobiDBLite mobidb-lite consensus disorder prediction 692 708 - -
MobiDBLite mobidb-lite consensus disorder prediction 1034 1050 - -
MobiDBLite mobidb-lite consensus disorder prediction 350 366 - -
MobiDBLite mobidb-lite consensus disorder prediction 1355 1375 - -
MobiDBLite mobidb-lite consensus disorder prediction 1013 1033 - -
MobiDBLite mobidb-lite consensus disorder prediction 1089 1109 - -
MobiDBLite mobidb-lite consensus disorder prediction 1203 1234 - -
MobiDBLite mobidb-lite consensus disorder prediction 823 843 - -
MobiDBLite mobidb-lite consensus disorder prediction 1165 1185 - -
MobiDBLite mobidb-lite consensus disorder prediction 882 898 - -
MobiDBLite mobidb-lite consensus disorder prediction 540 556 - -
MobiDBLite mobidb-lite consensus disorder prediction 519 539 - -
MobiDBLite mobidb-lite consensus disorder prediction 1186 1202 - -
MobiDBLite mobidb-lite consensus disorder prediction 844 860 - -
MobiDBLite mobidb-lite consensus disorder prediction 861 881 - -
MobiDBLite mobidb-lite consensus disorder prediction 899 919 - -
MobiDBLite mobidb-lite consensus disorder prediction 806 822 - -
MobiDBLite mobidb-lite consensus disorder prediction 1452 1468 - -
MobiDBLite mobidb-lite consensus disorder prediction 1110 1126 - -
MobiDBLite mobidb-lite consensus disorder prediction 595 615 - -
MobiDBLite mobidb-lite consensus disorder prediction 785 805 - -
MobiDBLite mobidb-lite consensus disorder prediction 502 518 - -
MobiDBLite mobidb-lite consensus disorder prediction 481 501 - -
MobiDBLite mobidb-lite consensus disorder prediction 920 936 - -
MobiDBLite mobidb-lite consensus disorder prediction 633 653 - -
MobiDBLite mobidb-lite consensus disorder prediction 292 311 - -
MobiDBLite mobidb-lite consensus disorder prediction 405 425 - -
MobiDBLite mobidb-lite consensus disorder prediction 747 767 - -
MobiDBLite mobidb-lite consensus disorder prediction 958 974 - -
MobiDBLite mobidb-lite consensus disorder prediction 1317 1337 - -
MobiDBLite mobidb-lite consensus disorder prediction 426 442 - -
MobiDBLite mobidb-lite consensus disorder prediction 1279 1299 - -
MobiDBLite mobidb-lite consensus disorder prediction 937 957 - -
MobiDBLite mobidb-lite consensus disorder prediction 768 784 - -
MobiDBLite mobidb-lite consensus disorder prediction 730 746 - -
MobiDBLite mobidb-lite consensus disorder prediction 975 995 - -
MobiDBLite mobidb-lite consensus disorder prediction 269 1497 - -
MobiDBLite mobidb-lite consensus disorder prediction 709 729 - -
MobiDBLite mobidb-lite consensus disorder prediction 996 1012 - -
MobiDBLite mobidb-lite consensus disorder prediction 443 463 - -
MobiDBLite mobidb-lite consensus disorder prediction 1262 1278 - -
MobiDBLite mobidb-lite consensus disorder prediction 464 480 - -
MobiDBLite mobidb-lite consensus disorder prediction 1241 1261 - -
MobiDBLite mobidb-lite consensus disorder prediction 1338 1354 - -
MobiDBLite mobidb-lite consensus disorder prediction 1300 1316 - -
MobiDBLite mobidb-lite consensus disorder prediction 654 670 - -
MobiDBLite mobidb-lite consensus disorder prediction 367 387 - -
MobiDBLite mobidb-lite consensus disorder prediction 1051 1071 - -
MobiDBLite mobidb-lite consensus disorder prediction 1072 1088 - -
MobiDBLite mobidb-lite consensus disorder prediction 388 404 - -
Coils Coil Coil 1334 1368 - -
Coils Coil Coil 460 494 - -
Coils Coil Coil 612 646 - -
Coils Coil Coil 916 950 - -
Coils Coil Coil 1106 1140 - -
Coils Coil Coil 840 874 - -
Coils Coil Coil 802 836 - -
Coils Coil Coil 1144 1178 - -
Coils Coil Coil 954 988 - -
Coils Coil Coil 1296 1330 - -
Coils Coil Coil 1410 1444 - -
Coils Coil Coil 498 532 - -
Coils Coil Coil 1448 1482 - -
Coils Coil Coil 308 342 - -
Coils Coil Coil 764 798 - -
Coils Coil Coil 1372 1406 - -
Coils Coil Coil 992 1026 - -
Coils Coil Coil 688 722 - -
Coils Coil Coil 1030 1064 - -
Coils Coil Coil 726 760 - -
Coils Coil Coil 1258 1292 - -
Coils Coil Coil 878 912 - -
Coils Coil Coil 536 570 - -
Coils Coil Coil 1068 1102 - -
Coils Coil Coil 346 380 - -
Coils Coil Coil 650 684 - -
Coils Coil Coil 422 456 - -
Coils Coil Coil 1182 1216 - -
Coils Coil Coil 384 418 - -
Coils Coil Coil 1220 1254 - -
Coils Coil Coil 284 304 - -
Coils Coil Coil 574 608 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_022683286.1 uncharacterized protein LOC111257626 [Setaria italica] 3.08E-62
TrEMBL A0A1B6PET8 F-box domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3007G005900 PE=4 SV=2 1.13E-88
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 10 AH08.53, BH01.1445, BH01.1446, BH03.3228, BH03.3764 ...
BH07.477, BH09.2588, CH03.3427, CH08.194, CH08.204
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_5AG0365330, gene-QOZ80_5AG0365340 ...
gene-QOZ80_8BG0642080, gene-QOZ80_8BG0642090
Poaceae Hordeum vulgare 10 HORVU.MOREX.r3.1HG0079390.1.CDS1 ...
HORVU.MOREX.r3.2HG0108310.1.CDS1, HORVU.MOREX.r3.2HG0109440.1, HORVU.MOREX.r3.3HG0322680.1.CDS1, HORVU.MOREX.r3.4HG0416780.1.CDS1, HORVU.MOREX.r3.4HG0416820.1.CDS1, HORVU.MOREX.r3.6HG0613500.1.CDS1, HORVU.MOREX.r3.6HG0613520.1.CDS1, HORVU.MOREX.r3.6HG0623980.1.CDS1, HORVU.MOREX.r3.6HG0624050.1.CDS1
Poaceae Lolium multiflorum 29 gene-QYE76_000935, gene-QYE76_006121, gene-QYE76_016699 ...
gene-QYE76_024777, gene-QYE76_025973, gene-QYE76_025974, gene-QYE76_029767, gene-QYE76_029770, gene-QYE76_033224, gene-QYE76_033228, gene-QYE76_033232, gene-QYE76_033303, gene-QYE76_038548, gene-QYE76_048472, gene-QYE76_048473, gene-QYE76_048476, gene-QYE76_048503, gene-QYE76_048511, gene-QYE76_058660, gene-QYE76_058661, gene-QYE76_060413, gene-QYE76_061357, gene-QYE76_062292, gene-QYE76_062303, gene-QYE76_071496, gene-QYE76_071503, gene-QYE76_071519, gene-QYE76_071522, gene-QYE76_071525
Poaceae Oryza coarctata 1 Oco13G007960
Poaceae Oryza sativa 3 LOC_Os07g31560.1, LOC_Os07g31680.1, LOC_Os07g31710.1
Poaceae Paspalum vaginatum 4 gene-BS78_07G006600, gene-BS78_07G006800, gene-BS78_K327000 ...
gene-BS78_07G009100
Poaceae Puccinellia tenuiflora 19 Pt_Chr0100823, Pt_Chr0101034, Pt_Chr0103633, Pt_Chr0106038 ...
Pt_Chr0106660, Pt_Chr0106677, Pt_Chr0106678, Pt_Chr0203382, Pt_Chr0207613, Pt_Chr0305978, Pt_Chr0306469, Pt_Chr0306512, Pt_Chr0401626, Pt_Chr0505095, Pt_Chr0600840, Pt_Chr0600841, Pt_Chr0600848, Pt_Chr0601231, Pt_Chr0702758
Poaceae Thinopyrum elongatum 13 Tel1E01G598100, Tel1E01G598400, Tel1E01G598500 ...
Tel1E01G598600, Tel2E01G257200, Tel3E01G812800, Tel4E01G625500, Tel4E01G625800, Tel4E01G650100, Tel5E01G085400, Tel5E01G096700, Tel5E01G380300, Tel6E01G634100
Poaceae Triticum dicoccoides 2 gene_TRIDC2AG015010, gene_TRIDC5AG006330
Poaceae Triticum aestivum 49 TraesCS1A02G367400.1.cds1, TraesCS1A02G442900.1.cds1 ...
TraesCS1B02G386100.1.cds1, TraesCS1B02G476900.1.cds1, TraesCS1B02G477000.1.cds1, TraesCS1D02G373200.1, TraesCS1D02G373300.1.cds1, TraesCS1D02G373500.1.cds1, TraesCS2A02G088100.1, TraesCS2A02G345000.1.cds1, TraesCS2A02G345100.1.cds1, TraesCS2A02G345200.1.cds1, TraesCS2B02G363500.1, TraesCS2D02G038600.1.cds1, TraesCS2D02G124400.1, TraesCS2D02G343400.1, TraesCS2D02G343500.1, TraesCS3A02G495600.1.cds1, TraesCS3B02G557700.1, TraesCS3B02G559700.1.cds1, TraesCS3B02G565400.1.cds1, TraesCS4B02G399100.1.cds1, TraesCS5A02G035600.1.cds1, TraesCS5A02G235100.1.cds1, TraesCS5A02G551100.1, TraesCS5B02G035400.1.cds1, TraesCS5B02G042700.1, TraesCS5B02G044200.1.cds1, TraesCS5B02G340600.1.cds1, TraesCS5D02G048700.1, TraesCS5D02G049300.1, TraesCS5D02G242100.1.cds1, TraesCS6A02G357600.1, TraesCS6B02G132000.1.cds1, TraesCS6B02G328800.1.cds1, TraesCS6B02G389600.1, TraesCS6B02G389900.1.cds1, TraesCS6D02G279100.1.cds1, TraesCS6D02G339900.1.cds1, TraesCS6D02G340000.1.cds1, TraesCS6D02G340100.1.cds1, TraesCS7A02G192800.1.cds1, TraesCS7A02G402700.1.cds1, TraesCS7D02G396400.1.cds1, TraesCSU02G054800.1.cds1, TraesCSU02G055700.1.cds1, TraesCSU02G115800.1.cds1, TraesCSU02G145000.1.cds1, TraesCSU02G268600.1.cds1
Poaceae Zea mays 2 Zm00001eb259990_P001, Zm00001eb260250_P001
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.