Basic Information
Locus ID:
BH01.1282
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 11121543 | 11122316 | - | BH01.1282 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.93 | 28,627.56 Da | 52.38 | 84.32 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 3 | 235 | 1.3E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 243 | 2.0E-61 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 29 | 252 | 4.8E-61 | - |
| SMART | SM00220 | serkin_6 | 3 | 235 | 1.4E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 235 | 35.297558 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 59 | 71 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63370.2 | Protein kinase superfamily protein. | 7.24E-45 |
| RefSeq | XP_025791569.1 | putative cyclin-dependent kinase F-2 [Panicum hallii] | 3.34E-131 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 9.41E-55 | |
| TrEMBL | A0A3L6TJ28 | Putative cyclin-dependent kinase F-2 OS=Panicum miliaceum OX=4540 GN=C2845_PM01G33240 PE=3 SV=1 | 3.06E-133 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology