Basic Information
Locus ID:
BH01.1240
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 10795458 | 10796537 | - | BH01.1240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 39,723.49 Da | 50.59 | 87.05 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 38 | 331 | 6.8E-57 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 33 | 344 | 6.44E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 132 | 356 | 2.4E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 29 | 131 | 1.3E-15 | - |
| SMART | SM00220 | serkin_6 | 38 | 331 | 2.4E-75 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 331 | 41.219704 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 44 | 67 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 163 | 175 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67580.1 | Protein kinase superfamily protein. | 3.8E-52 |
| RefSeq | XP_039783190.1 | putative cyclin-dependent kinase F-2 [Panicum virgatum] | 7.46E-172 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 1.92E-68 | |
| TrEMBL | A0A1E5V081 | Putative cyclin-dependent kinase F-2 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0020441 PE=3 SV=1 | 1.15E-178 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology