Basic Information
Locus ID:
BH01.1141
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CPK30
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 9795789 | 9798797 | - | BH01.1141 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.11 | 63,934.05 Da | 41.43 | 78.35 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 410 | 469 | 1.05767E-16 | IPR002048 |
| CDD | cd00051 | EFh | 481 | 543 | 4.85378E-18 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 103 | 361 | 3.33307E-122 | - |
| Pfam | PF13499 | EF-hand domain pair | 408 | 470 | 1.7E-11 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 481 | 543 | 1.1E-13 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 104 | 362 | 4.3E-70 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 100 | 371 | 2.02E-85 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 386 | 555 | 5.73E-42 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 190 | 371 | 4.6E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 106 | 189 | 6.1E-25 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 372 | 545 | 1.8E-52 | - |
| SMART | SM00054 | efh_1 | 517 | 545 | 1.2E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 409 | 437 | 3.5E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 445 | 473 | 0.07 | IPR002048 |
| SMART | SM00054 | efh_1 | 481 | 509 | 0.71 | IPR002048 |
| SMART | SM00220 | serkin_6 | 104 | 362 | 3.7E-95 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 513 | 548 | 14.5413 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 441 | 476 | 10.078037 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 104 | 362 | 47.481064 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 405 | 440 | 15.461849 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 477 | 512 | 11.695971 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 418 | 430 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 526 | 538 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 224 | 236 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 454 | 466 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 110 | 133 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 490 | 502 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 68 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G74740.1 | calcium-dependent protein kinase 30. member of Calcium Dependent Protein Kinase | 6.17E-260 |
| RefSeq | XP_034570363.1 | calcium-dependent protein kinase 9-like [Setaria viridis] | 0 |
| Q6AVI8 | Calcium-dependent protein kinase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4V6D0S5 | Calcium-dependent protein kinase 30 OS=Setaria viridis OX=4556 GN=SEVIR_9G134400v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology