Basic Information
Locus ID:
BH01.1125
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Thioesterase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH01 | 9591092 | 9593099 | + | BH01.1125 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.41 | 32,937.90 Da | 46.12 | 64.50 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03443 | PaaI_thioesterase | 145 | 241 | 6.58481E-21 | - |
| Pfam | PF03061 | Thioesterase superfamily | 173 | 244 | 3.1E-14 | IPR006683 |
| SUPERFAMILY | SSF54637 | Thioesterase/thiol ester dehydrase-isomerase | 139 | 242 | 7.88E-22 | IPR029069 |
| Gene3D | G3DSA:3.10.129.10 | Hotdog Thioesterase | 129 | 253 | 8.1E-42 | - |
| TIGRFAM | TIGR00369 | unchar_dom_1: uncharacterized domain 1 | 144 | 240 | 6.3E-17 | IPR003736 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 132 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48320.1 | Thioesterase superfamily protein. | 5.25E-50 |
| RefSeq | XP_025792801.1 | 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like isoform X4 [Panicum hallii] | 1.28E-72 |
| Q9SX65 | 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 OS=Arabidopsis thaliana OX=3702 GN=DHNAT1 PE=1 SV=1 | 5.06E-49 | |
| TrEMBL | A0A3L6TIK0 | 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like isoform X1 OS=Panicum miliaceum OX=4540 GN=C2845_PM01G31890 PE=4 SV=1 | 6.27E-72 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||