Basic Information
Locus ID:
AsparagusV1_Unassigned.673.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
acetyltransferase component of pyruvate dehydrogenase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Un388 | 92222 | 97674 | - | AsparagusV1_Unassigned.673.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.51 | 18,933.39 Da | 30.62 | 99.55 | 0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06849 | lipoyl_domain | 1 | 70 | 2.56782E-26 | - |
| Pfam | PF00364 | Biotin-requiring enzyme | 1 | 69 | 1.8E-16 | IPR000089 |
| SUPERFAMILY | SSF51230 | Single hybrid motif | 1 | 77 | 1.19E-22 | IPR011053 |
| Gene3D | G3DSA:2.40.50.100 | - | 1 | 93 | 6.6E-25 | - |
| ProSiteProfiles | PS50968 | Biotinyl/lipoyl domain profile. | 1 | 71 | 26.699949 | IPR000089 |
| ProSitePatterns | PS00189 | 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. | 21 | 50 | - | IPR003016 |
KEGG Pathway
Pathway:
ko00010 (Glycolysis / Gluconeogenesis)
map00010 (Glycolysis / Gluconeogenesis)
ko00020 (Citrate cycle (TCA cycle))
map00020 (Citrate cycle (TCA cycle))
ko00620 (Pyruvate metabolism)
map00620 (Pyruvate metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34430.1 | 2-oxoacid dehydrogenases acyltransferase family protein. | 0 |
| RefSeq | XP_020262805.1 | dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex, chloroplastic-like [Asparagus officinalis] | 0 |
| Q9C8P0 | Dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB3003 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1R3L6D5 | Lipoyl-binding domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_UnF6730 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000013134 |
| Arecaceae | Cocos nucifera | 2 | COCNU_03G001150, COCNU_14G007100 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_01.1284.V1.1, AsparagusV1_05.1496.V1.1 ... |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g01930 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb1G01234, Lb2G15417 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr07G017130 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5BG020310 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG07.1169 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-26499 |