HalophFGD

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Basic Information
Locus ID: AsparagusV1_Unassigned.570.V1.1
Species & Taxonomic ID: Asparagus officinalis & 4686
Genome Assembly: GCA_001876935.1
Description: Sec-independent protein translocase protein
Maps and Mapping Data
Chromosome Start End Strand ID
Un312 49267 51575 + AsparagusV1_Unassigned.570.V1.1
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.42 12,846.44 Da 54.81 95.00 -0.16
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 6.0 -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_020275379.1 uncharacterized protein LOC109849906 isoform X2 [Asparagus officinalis] 0
TrEMBL A0A1R3L6M4 Lipoprotein OS=Asparagus officinalis OX=4686 GN=A4U43_UnF5700 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Asparagaceae Asparagus officinalis 6 AsparagusV1_04.1263.V1.1, AsparagusV1_05.2801.V1.1 ...
AsparagusV1_07.1737.V1.1, AsparagusV1_07.361.V1.1, AsparagusV1_07.3749.V1.1, AsparagusV1_Unassigned.570.V1.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.