Basic Information
Locus ID:
AsparagusV1_Unassigned.527.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Un281 | 20024 | 28975 | - | AsparagusV1_Unassigned.527.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.85 | 68,521.70 Da | 40.92 | 82.20 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 352 | 600 | 4.73283E-127 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 346 | 600 | 2.7E-68 | IPR001245 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 52 | 239 | 3.0E-65 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 322 | 599 | 9.85E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 339 | 423 | 2.4E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 425 | 611 | 2.3E-61 | - |
| SMART | SM00220 | serkin_6 | 346 | 604 | 6.3E-59 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 346 | 604 | 44.42812 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 467 | 479 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 352 | 373 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 571 | 593 | 3.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 508 | 518 | 3.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 420 | 433 | 3.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 527 | 549 | 3.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 461 | 479 | 3.3E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 318 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24480.3 | - | 0 |
| RefSeq | XP_020250132.1 | LOW QUALITY PROTEIN: serine/threonine-protein kinase CTR1-like [Asparagus officinalis] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1R3L6Q1 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_UnF5270 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology