Basic Information
Locus ID:
AsparagusV1_Unassigned.486.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
NAC domain transcription factor superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Un267 | 83197 | 88647 | + | AsparagusV1_Unassigned.486.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 46,284.96 Da | 48.10 | 70.48 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 53 | 148 | 6.2E-11 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 59 | 167 | 1.83E-22 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 29 | 172 | 2.4E-22 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 13 | 167 | 17.795996 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 104 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_020250092.1 | LOW QUALITY PROTEIN: SUPPRESSOR OF GAMMA RESPONSE 1-like [Asparagus officinalis] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1R3L6U0 | NAC domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_UnF4860 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology