Basic Information
Locus ID:
AsparagusV1_Unassigned.222.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Un95 | 409671 | 421648 | + | AsparagusV1_Unassigned.222.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.93 | 81,538.86 Da | 44.11 | 93.15 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 3 | 112 | 1.67364E-33 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 652 | 693 | 4.98256E-23 | - |
| Pfam | PF04564 | U-box domain | 648 | 718 | 7.6E-19 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 376 | 612 | 1.2E-37 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 355 | 625 | 1.75E-63 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 645 | 718 | 1.5E-24 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 647 | 719 | 5.1E-28 | IPR013083 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 446 | 631 | 3.5E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 357 | 445 | 2.2E-27 | - |
| SMART | SM00504 | Ubox_2 | 651 | 714 | 2.2E-29 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 647 | 721 | 36.906025 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 373 | 626 | 31.142162 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 491 | 503 | - | IPR008266 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 379 | 400 | - | IPR017441 |
| Coils | Coil | Coil | 324 | 351 | - | - |
| Coils | Coil | Coil | 226 | 309 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_020249824.1 | U-box domain-containing protein 33-like isoform X1 [Asparagus officinalis] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1R3L7E9 | E3 ubiquitin ligase OS=Asparagus officinalis OX=4686 GN=A4U43_UnF2220 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology